Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTIQKELEGLDIRFDEPLKKYTYTKVGGPADYLAFPRNRLELSRIVKFANSQNIPWMVLGNASNIIVRDGGIRGFVIMFDKL-STVTVNGYVIEAEAGANLIETTRIARYHSLTGFEFACGIPGSVGGAVFMNAGAYGGEIAHILLSAQVLTPQGELKTIEARNMQFGYRHSVIQESGDIVISAKFALKPGDHLMITQEMDRLTYLRELKQPLEYPSCGSVFKRPPGHFAGQLISEAHLKGQRIGGVEVSQKHAGFMVNIAEGSAQDYENLIEHVINTVESTSGVHLEPEVRIIGESLL |
| 2GQT Chain:A ((3-267)) | -----------FMRVERVLLKDYTTLGVGGPAELW-TVETREELKRA------TEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY---DLKGWVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPP-GGIVTRVRLKLKERPKEEILRRMAEVDRAR-KGQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEE----LPLELEWEVWP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128254 for 2188 contacts (-58.6/contact) +
2D Compatibility (PS) -27590 + (NN) -2818 + (LL) 2780
1D Compatibility (HY) -10800 + (ID) 4800
Total energy: -171482.0 ( -78.37 by residue)
QMean score : 0.437
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