Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVRIYHNPNCGTSRNVLAIIRHCGIEPEIIYYLKTPPSRMELVELLLEMKLSARELLRTDVPAYEKFNLESSSVTDEEMIDAMIQDPILINRPIVVTSKGAKLCRPCEEILTILPVKMEKDFVKEDGQIIQSL
3L78 Chain:A ((1-117))
--MVTLFLSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKVFQKLDIDVDELSVSELINLISKNPSLLRRPIIMDNKRMQIGFNEDEIRAFLPRD----------------
General information:
TITO was launched using:
RESULT:
Template:
3L78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84912 for 843 contacts (-100.7/contact) +
2D Compatibility (PS) -12649 + (NN) -5498 + (LL) 1652
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -108257.0 ( -128.42 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_3L78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L78-query.scw
PDB file :
Tito_Scwrl_3L78.pdb
: