Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLKSLSIKNYRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIVGKNNSGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPKLEFQLILGIDDENDLISSFEDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEELVKIKSSPREKIEQYDQGYQKELRYRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKVATIEANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSAVSSIESTKNLKMNLHPDVTLEKIFANSIIYEYQEGNNNIPESQFGMGYTNLMVIIAKIVDYIELYSEKDINGSVNILCIEEPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQIIITTHSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYEYIKKYLRLEITDIFFADAVVLVEGVSEETYLRYEIDRHSILKNHHVKVYRIDGAYAHQFISLLDLLGVRTVIFTDLDLKRSESEKKVDIKDNAEPDVIPSNIPDLEEKYGGVASSLTTNGTIQYFVKKLLNDDKAKYDKINSKIIEILTDKEELVVEYNNISMYSQGKINKYYATSFEEAIVLTNAGNEDENKYKKSLIKALQYVHPNMRYFGDIDETSEIADKSYMYQVKLSDGKSKFSTGIVYLSITDKEFSLKRPQYVESGLNLLCGYFEE |
3QF7 Chain:A ((273-350)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IERPARGLSGGERALISISLAMSLAEVA------SGRLDAFFIDEGFSSLDTENKEKIASVLKELER---------LNKVIVFITHDREFSEAFDRKLRITGGVVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40282 for 471 contacts (-85.5/contact) +
2D Compatibility (PS) -8511 + (NN) -5372 + (LL) 44256
1D Compatibility (HY) 400 + (ID) 600
Total energy: -10109.0 ( -21.46 by residue)
QMean score : 0.477
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