Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKE-IGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 4O90 Chain:B ((10-345)) | FRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQ-------------------------------------------------SSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNE---VAEKLDWNEVPNNPFFCGDVDAVPRFEA----LVTSLREQGTSCGAKLEILAEKVPVGWGEPV-FDR-LDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELT---SHGFL--ANHAGGILGGISSGQTIRVAIALKPT----------------------GRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137110 for 2192 contacts (-62.6/contact) +
2D Compatibility (PS) -30224 + (NN) -16805 + (LL) 7492
1D Compatibility (HY) -15200 + (ID) 5850
Total energy: -197697.0 ( -90.19 by residue)
QMean score : 0.454
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