Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVH-LEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
3TBE Chain:E ((20-214)) | --------------------------------------------------FKEAVTKIDRVEINRRLELAYAYNASIAGAKALKDPYSAE------VEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKT-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83970 for 1449 contacts (-58.0/contact) +
2D Compatibility (PS) -19714 + (NN) -8517 + (LL) 9376
1D Compatibility (HY) -21600 + (ID) 5400
Total energy: -129825.0 ( -89.60 by residue)
QMean score : 0.470
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