Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
4PJ0 Chain:T ((1-29))
------------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRINLWERFCNWVTSTDN
General information:
TITO was launched using:
RESULT:
Template:
4PJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11312 for 151 contacts (-74.9/contact) +
2D Compatibility (PS) -4429 + (NN) -1982 + (LL) 7580
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -13293.0 ( -88.03 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_4PJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PJ0-query.scw
PDB file :
Tito_Scwrl_4PJ0.pdb
: