Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDKPISFRDKDGNFVSAADVWNAEKLEELFN---TLNPNRKLRLEREKLAKEKG
1CEU Chain:A ((1-51))
MEQAP----EDQGPQREPYNDWTLELLEELKNEAVRHFPRIWLHSLGQHIYETYG
General information:
TITO was launched using:
RESULT:
Template:
1CEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12710 for 207 contacts (61.4/contact) +
2D Compatibility (PS) -5600 + (NN) -7001 + (LL) 408
1D Compatibility (HY) 0 + (ID) 650
Total energy: -133.0 ( -0.64 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1CEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CEU-query.scw
PDB file :
Tito_Scwrl_1CEU.pdb
: