Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKDQFIGVKQPLSKKLSQLVFILFFSLFTVFSVLVYTSATRYVLHREKINVGRSLEKTRVRLSQANSSLTSDDILEILYNQVFADDIYPHKRQNGIVRTGESIDSILYANQEMTLYDVNRKPVFSTLRTGMPTIGKSMGKVIISKVADMEGFVGTKAIYSQKTGQLLGYVQIFYNLGRYYSMRQNIIVFLIMMEVLGTVLALVVINSATKRIVRPVKNLHDLMHQISENPSNLEIRSKVRSEDEIGELSRIFDGMLDQLEDYTRRQSQFISDVSHELRTPVAVVKGHIGLLQRWGKDDPEILEESLAAAYHEADRMSLMINDMLNMIRVQGSLELHQDEVTDLSSSISVVIENFRILREDFQFIFENNISDIVWGKIY--KIHFEQALMILIDNAIKYSPSYKEVSVVLSVDNDFATVVVKDKGEGISDEDIEFIFDRFYRTDKSRNRESTQAGLGIGLSVFKQIMDAYHLKVDIKSELNQGTEFIVRIPIKKFEETKEI |
4BIU Chain:D ((66-296)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKE-----LERIETEAQRLDSMINDLLVMSRNQQKNAL-VSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPW-PLYGNPNALESALENIVRNALRYS--HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRES--GGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112153 for 1664 contacts (-67.4/contact) +
2D Compatibility (PS) -25050 + (NN) -8331 + (LL) 21216
1D Compatibility (HY) -10800 + (ID) 3900
Total energy: -139018.0 ( -83.54 by residue)
QMean score : 0.434
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