Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKD-NLFMEEIERVATEKYEAIKEKLPNADNETIAILMAINALSVQLSREIDIEKMEDELNKLRSKTISDIKEKVSED
1T3U Chain:A ((6-89))
-----------TLTVQILDKEYCINCPDDERANLESAARYLDGKMREIRSSGKVIGADRVAVMAALNITHDLLHRKERLDQESSSTRERVRELLDRVDRALAN-
General information:
TITO was launched using:
RESULT:
Template:
1T3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10133 for 400 contacts (-25.3/contact) +
2D Compatibility (PS) -9122 + (NN) -6852 + (LL) 752
1D Compatibility (HY) 2000 + (ID) 500
Total energy: -23855.0 ( -59.64 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1T3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3U-query.scw
PDB file :
Tito_Scwrl_1T3U.pdb
: