Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAAR-DVKELQYPLLALLVSGGHTELVYVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQ-DTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERLATDISPDI-DVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAKPSLAFEGL |
4WQ5 Chain:B ((3-327)) | -----VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLEGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRA--DIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251145 for 2906 contacts (-86.4/contact) +
2D Compatibility (PS) -34832 + (NN) -15910 + (LL) 668
1D Compatibility (HY) -24800 + (ID) 7050
Total energy: -333069.0 ( -114.61 by residue)
QMean score : 0.559
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