Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESG-AVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFPDG--KEVSVLLALAATSS--AIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
3URR Chain:A ((3-152))
MNRLAKILPLENVVIGLSVTSKKRVFEQAGLIFENQNGIARSTVTDNLFARE-RLGST-GLGEGVAIPHGRIK-GLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLE-ILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQP-----------
General information:
TITO was launched using:
RESULT:
Template:
3URR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87524 for 1157 contacts (-75.6/contact) +
2D Compatibility (PS) -15342 + (NN) -2378 + (LL) 864
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -112230.0 ( -97.00 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3URR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3URR-query.scw
PDB file :
Tito_Scwrl_3URR.pdb
: