Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLTACGNGMGSSMVIKMKVENALRQ-LGVSNFESASCSVGEAK-GLAANYDIVVASNHLIHELDGRTKGHLVGLDNLMDDNEIKTKLQEIL
2ARK Chain:A ((4-62))
MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTE---VRLKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLGDLWGEIDGKIACAF
General information:
TITO was launched using:
RESULT:
Template:
2ARK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22450 for 365 contacts (-61.5/contact) +
2D Compatibility (PS) -6357 + (NN) -3624 + (LL) 156
1D Compatibility (HY) 2400 + (ID) 600
Total energy: -30475.0 ( -83.49 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_2ARK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ARK-query.scw
PDB file :
Tito_Scwrl_2ARK.pdb
: