Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENLGQLAINQARENGGKLEVISKVKVEDKRDLSIAYTPGVASVSSAIAEDVELAYELTTKKNTVAVVSDGSAVLGLGDIGPEAAMPVMEGKAALFKRFANVDAVPIVLKTNDTEEIISIVKAISPTFGGINLEDISAPRCFEIEQRLIEECDIPVFHDDQHGTAIVVLAALFNSLKLVKKDIEDIRVVVNGGGSAGLSITRKLLSAGAKHVTVVDRFGIINDKDRES-LAPHHKAIAKLTNREFQSGSLEDALENADVFIGVSAPEALHAEWISKMADKPIVFAMANPIPEIYPDQALKAGAYIVGTGRSDFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAARGIA-SLIPEEELSTTHIIPNAFQNDVADVVAKSVSNAVQK |
| 2HAE Chain:B ((14-366)) | -----------------GKIRTALPVEKVDRETLSLLYTPGVADVARACAEDPEKTYVYTSRWNTVAVVSDGSAVLGLGNIGPYGALPVMEGKAFLFKAFADIDAFPICLSESEEEKIISIVKSLEPSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEY--EIARITNPERLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREAGAFIVATGRSDHPNQVNNLLAFPGIMKGAVEKRSK-ITKNMLLSAVEAIARSCEPEPE----RIIPEAFDMKVHLNVYTAVKGSA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -216279 for 2955 contacts (-73.2/contact) +
2D Compatibility (PS) -37294 + (NN) -15210 + (LL) 1468
1D Compatibility (HY) -34800 + (ID) 10350
Total energy: -312465.0 ( -105.74 by residue)
QMean score : 0.544
|
|
|