Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQEKNRGIHLYTKFICLDCERKVISTST----SDPDYAFYVKKLKSIHTPPLYS
2AUS Chain:D ((4-52))
------RIRKCPKCGRYTL-------KETCPVCGEKTKVAHPPRFSPEDPYGEYRRRLKREL------
General information:
TITO was launched using:
RESULT:
Template:
2AUS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2468 for 218 contacts (-11.3/contact) +
2D Compatibility (PS) -4612 + (NN) -1994 + (LL) 1052
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -6922.0 ( -31.75 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_2AUS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AUS-query.scw
PDB file :
Tito_Scwrl_2AUS.pdb
: