Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNNHFFYVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVEL---IFAESFSTKREAMQAEYYFKKLTR-KKKELYIEEKRNSKEAVYVKAPNEL
3EWG Chain:A ((1-80))
------MIFAVRTMV-----GQEKNIAGLMASRAEKEQLDVYSILASESLKGYVLVEA-ETKGDVEELIKGMPRVRGIVPGTIAIEEIEPLL-----------
General information:
TITO was launched using:
RESULT:
Template:
3EWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2945 for 512 contacts (-5.8/contact) +
2D Compatibility (PS) -7905 + (NN) 588 + (LL) 1656
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -11856.0 ( -23.16 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_3EWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EWG-query.scw
PDB file :
Tito_Scwrl_3EWG.pdb
: