Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVSY---HEHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVP------QPFFFYGFLNRQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEI-LGD-REIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
| 1PJQ Chain:A ((211-447)) | ---------PLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDR-LVSDDIMNLVRRDADRVFVGKRHCVPQEEINQILLREAQKGKRVVRL-KGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVT------G--ELDWENLAAEKQTLVFYMGLNQAATIQEKLIAFGMQADMPVALVENGTSVKQRVVHGVLTQLGELAQ--QVESPALIIVGRVVAL------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128324 for 1780 contacts (-72.1/contact) +
2D Compatibility (PS) -23549 + (NN) -9406 + (LL) 6304
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -165975.0 ( -93.24 by residue)
QMean score : 0.436
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