Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVP-------GCKHAFLPKHLAKPKNKRGIGVE-HASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
1DD9 Chain:A ((163-272))
--PNRLLVVEGYMDVVALAQYGINYAVASLG-STTADHIQLLFRA--TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGE-DP-----DTLVRKEGKEAFEARMEQAMP--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50953 for 708 contacts (-72.0/contact) +
2D Compatibility (PS) -11064 + (NN) -2858 + (LL) 5792
1D Compatibility (HY) -1200 + (ID) 1100
Total energy: -61383.0 ( -86.70 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1DD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD9-query.scw
PDB file :
Tito_Scwrl_1DD9.pdb
: