Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGT-DDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVL-GEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR
1VQ0 Chain:A ((14-297))---IYYGTMFDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVANPKVELPLNEKGKFDVAGAIGQ-GVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLVDS-DGVKIAGGFAVQIIDRTLEQEKVEMIEKNIKNLPSISKLFQ-EAEPLDVLERIFGE-KVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMR-KEGKGEVVCKWCNTRYVFSEEELEELLKFKV-


General information:
TITO was launched using:
RESULT:

Template: 1VQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165380 for 2343 contacts (-70.6/contact) +
2D Compatibility (PS) -30345 + (NN) -5278 + (LL) 440
1D Compatibility (HY) -28400 + (ID) 5500
Total energy: -234463.0 ( -100.07 by residue)
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_1VQ0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VQ0-query.scw
PDB file : Tito_Scwrl_1VQ0.pdb: