Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDKG-FVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHHYLNNMYAKREIG-NDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNYG-SQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 3DAA Chain:A ((2-276)) | YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNEL--NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRP-LENLEKGVKATFVEDIRWLRCDIKSLNLLGAVLAKQEAHEKGC-YEAILHR-NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETKI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141944 for 2163 contacts (-65.6/contact) +
2D Compatibility (PS) -29363 + (NN) -11180 + (LL) 1072
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -199515.0 ( -92.24 by residue)
QMean score : 0.502
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