Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3Q8H Chain:B ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF----PRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3Q8H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120704 for 1303 contacts (-92.6/contact) +
2D Compatibility (PS) -16600 + (NN) -7786 + (LL) -204
1D Compatibility (HY) -14400 + (ID) 4650
Total energy: -164344.0 ( -126.13 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8H-query.scw
PDB file :
Tito_Scwrl_3Q8H.pdb
: