Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQS-YTGNRVIVVFDAHL-VKGL--------------EK-----------KQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
3ZDB Chain:A ((3-135))
VHLLIVDALNLIRRIHAVQ----GSP--CVETCQHALDQLIMHSQPTHAVAVFDD--SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCW-STSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLS----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZDB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31868 for 716 contacts (-44.5/contact) +
2D Compatibility (PS) -11233 + (NN) -6004 + (LL) 5712
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -47793.0 ( -66.75 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3ZDB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZDB-query.scw
PDB file :
Tito_Scwrl_3ZDB.pdb
: