Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAER-----------LEVKKYCSTCNSHTAHLETK
5AUN Chain:A ((68-118))
---EAVFKCRNCNY-EWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDF-----
General information:
TITO was launched using:
RESULT:
Template:
5AUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3544 for 224 contacts (-15.8/contact) +
2D Compatibility (PS) -4181 + (NN) -135 + (LL) 912
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -8548.0 ( -38.16 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_5AUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AUN-query.scw
PDB file :
Tito_Scwrl_5AUN.pdb
: