Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSAIETKKVVVEEIASKLKESKSTIIVDYRGLNVSEVTELRKQLREANVEFKVYKNTMTRRAVEQAE-----LNGLNDFLTGPNAIAFSTEDVVAPAKVLNDFAKNHEALEIKAGVIEGKVSTVEEVKALAELPSREGLLSMLLSVLQAPVRNLALAAKAVAEQKEEQGA
5AN9 Chain:C ((2-107))
SGAGSKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRG-IGAVLMGKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVG----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5AN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8337 for 616 contacts (-13.5/contact) +
2D Compatibility (PS) -10307 + (NN) -139 + (LL) 6304
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -18679.0 ( -30.32 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_5AN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AN9-query.scw
PDB file :
Tito_Scwrl_5AN9.pdb
: