Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLHELKPS-EGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPKRGF-TNINRKEYAVVNLDKLNGF-AEGTEVTPELLLETGVISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI |
5DM6 Chain:I ((4-143)) | ---HDLKPTPG-SRKDRKRVGRGPG-GTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNN-V-GTTYEVVKLSQLQDLED--TTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2081 for 719 contacts (2.9/contact) +
2D Compatibility (PS) -14960 + (NN) -4849 + (LL) 20
1D Compatibility (HY) -7200 + (ID) 3200
Total energy: -28108.0 ( -39.09 by residue)
QMean score : 0.501
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