Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGA-DVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV--------- |
3G5L Chain:A ((25-246)) | -------------------EGLKAAGEWHELKKM-------------------LPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQ--KAIEDIA-IEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTA--DGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPELKDLPEMQDEYRRPMMLLISATKQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66159 for 1569 contacts (-42.2/contact) +
2D Compatibility (PS) -22648 + (NN) -1859 + (LL) 2572
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -97344.0 ( -62.04 by residue)
QMean score : 0.236
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