Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHGGPDGGAV--------------------GG-KLLEKDVTLEVAFRVRDYLQEQGALVIMTRESDTDLAPEGTKGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKY------AENEKVAKYIQDELRRNLE-NTT----RKAKRIH-GIYLMQNVTKPGALIEVGFLSNPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE |
4LQ6 Chain:A ((3-215)) | ---------------------------------------GMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALG------------PCVDERANMANALRPNAIVSLHADGGP-ASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLY-GRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LQ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56980 for 1524 contacts (-37.4/contact) +
2D Compatibility (PS) -19302 + (NN) -8818 + (LL) 3160
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -89390.0 ( -58.65 by residue)
QMean score : 0.468
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