Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQ--------IELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNV----------TREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAAE-T---IHI-S-SLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKG----------FTEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
1GKL Chain:A ((49-293)) | --------INGTKSLNVYLPYGYDP-NKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNC-------------------TAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIA-------YANMNPQIEAMKALPHFDYTSDFSKGN---FYFLVAPGATHWWGYVRHYIYDALPYFFHELEHH- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95437 for 1718 contacts (-55.6/contact) +
2D Compatibility (PS) -22229 + (NN) -8630 + (LL) 1836
1D Compatibility (HY) -16400 + (ID) 1800
Total energy: -142660.0 ( -83.04 by residue)
QMean score : 0.435
|
|
|