Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYEEVEETHSGNVRFLHV-------HSMMEENMLSKMIVVTRNGKTDLDI---------EGVYEGYVVREY
3EOI Chain:A ((2-124))
LSRTVHHQQTAEITQQAADFIRYMNAINDYLYQHPERRAAGGQLTSAQLGLPATKNVSHLISQQRVFVWAKEKPGLMGALLEQSGDSALLARVENGRLLDTHGRRISITLPAVIPDQVIIWMN
General information:
TITO was launched using:
RESULT:
Template:
3EOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17524 for 609 contacts (-28.8/contact) +
2D Compatibility (PS) -10384 + (NN) -1972 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -28780.0 ( -47.26 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_3EOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EOI-query.scw
PDB file :
Tito_Scwrl_3EOI.pdb
: