Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDR---L---------KVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQ--NGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADI-KELRGTHSIYLYQPDQIYKLSMEFMRKVR |
| 4DM7 Chain:A ((33-318)) | -----------------------------------------GFESAYREVDGVKLHYVKGGQ-GPLVMLVHGFGQTW--YEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMDAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIA-GKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTR-LQMPTMTLAGGGHGGM----GTFQL---EQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56345 for 2368 contacts (-23.8/contact) +
2D Compatibility (PS) -28521 + (NN) -6497 + (LL) 5468
1D Compatibility (HY) -2800 + (ID) 2100
Total energy: -90795.0 ( -38.34 by residue)
QMean score : 0.385
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