Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 4G9S Chain:B ((18-91)) | ---------------------------------------------------YSGEIK-GYDYDTYTFYAKKGQKVHVSISNE----GADTYLFGPGIDDSVD-LSRYSP---ELDSHGQY-SLPASGKYELRVLQ------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 539 for 463 contacts (1.2/contact) +
2D Compatibility (PS) -7967 + (NN) -3540 + (LL) 11908
1D Compatibility (HY) 800 + (ID) 600
Total energy: 1140.0 ( 2.46 by residue)
QMean score : 0.231
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