Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MRLNRQFIRTQLIAQNILSKN--APAKRE--------NATENPAAVLEKAYSRLKSQSSTGGINQFNYSKTSVSGNSGTFSKVYQSANDRTVTDTGEETVIQSQNPYESESDIRIKILDEKYSRMNAINKTKSDPLGYIKDKYQNSKSPYFRSDLSAAERQAAYDNETEWLFKGKAQNYNLQDAVFR-NVTFHGEVEAENEKVYQRG----QVNQQLQVLLNRNHIHI----------PEGTELTFTITPIDYQVRVSGTDDQDLIKQIEQVLQSGDNSKELFLHIMKSQSSDSAQFSEEAYKKYQAAREMYEVTGYHLKDLEVIDG------RYVTPEGR---------DLMDVYKEELEKDPVQKQTASYAISYYRSELSKIAEAGYNAIPDFILSIDYSNGSLRDVGQSKS-YGTGDTGWLEALKRQTGVNY--------------------------------------------------- |
| 4OV8 Chain:A ((6-472)) | DTLNDVIQDPTRRNKLINDNNLLKGIIMGRDGPVPSSRELIVRPDTLRAIINNRATIETTTME---AEFTETLMESNYNSASVKVSAPCITANSEYSESSSFKNTETEKSMYTSSRYLFPQG-RIDF-------------TTPDSGDVIK------LSPQFTSGVQAALAKAT-GTEKREALQNLFQEY---GCVFRTKVHIGGVLSAHTMETFSRSENETEVKQDVKAGLEGAVKGWGGGATAGHGNTQGTITTSQNRKLNVKYIVNGGDYTK-IQNTEEWVASTNQSEH-WRVIEVTEVTAVADLLPQP-IRGQVKDLLKPLLGKWV-DVEKVPGLESLPVSVYRPKGAIPAGWFWLGDTADASKALLVKPTLPARSGRNPALTSLHQGSGMTEQPFVDLPQYQYLSTYFGSFAHDTPPGSTLRGLRPDHVLPGRYEMHGDTISTAVYVTRPVDVPFPEDEAFDLKSLVRVKLPGSGNPPKPRSALKKSMVLFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 124943 for 2604 contacts (48.0/contact) +
2D Compatibility (PS) -37693 + (NN) -2161 + (LL) 2216
1D Compatibility (HY) -6400 + (ID) 3850
Total energy: 77055.0 ( 29.59 by residue)
QMean score : 0.155
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