Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MGAIERSGYTFQPEFSVVRQNGAIHVYHQGEFVEEIEFEFNGEYPDHDLIEELVNHYCFEHEI
3SHG Chain:B ((1-61))
VLSEEEIEYRRRDARNALASQRLEG---LEPDPQVVAQMERVVVGELETSDVIKDLMERIKREE--
General information:
TITO was launched using:
RESULT:
Template:
3SHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1782 for 312 contacts (-5.7/contact) +
2D Compatibility (PS) -6118 + (NN) -258 + (LL) 700
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -9658.0 ( -30.96 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_3SHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SHG-query.scw
PDB file :
Tito_Scwrl_3SHG.pdb
: