Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKWIYVVLVLSIAGIGGFSVHAASSAHEKHLNVSKMNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFKVVNALIGLQVKAVRDEYDVKRWDGVKREFESWNRDHTLGSAMRESAIWYYQALARDIGEERMKTWLHTLSYGNEDISGGIDQFWLQSSLTISPLEQETFLEKLAKEELPFDKPVMKIVKRMMIQEEGDHYTLYGKTGTRLTDMGLGWFVGFIKTEHGSYVFVTNVD--DSGTKAKNITVDILKKYGLITS
4S2M Chain:C ((16-236))---------------------------------------------SQGVVVLWNENKQQGFTNNLKRANQAFLPASTFKIPNSLIALDLGVVKDEHQVFKWDGQTRDIATWNRDHNLITAMKYSVVPVYQEFARQIGEARMSKMLHAFDYGNEDISGNVDSFWLDGGIRISATEQISFLRKLYHNKLHVSERSQRIVKQAMLTEANGDYIIRAKTG---YDTKIGWWVGWVELDDNVWFFAMNMDMP-GLGLRQAITKEVLKQEKII--


General information:
TITO was launched using:
RESULT:

Template: 4S2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1103 -127937 -115.99 -592.30
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -115.99
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_4S2M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4S2M-query.scw
PDB file : Tito_Scwrl_4S2M.pdb: