Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------------------------------------MNLNFIVPDINMTFGDMKFM-----GLNRERYVYDRENNKRTD--VLESRIYNIASAVQGGQIEVTIPEYAGAKEIPPFADIELKNPKISAMATSQRDSTYANVMWKLEADDIVVKGGSSVKPAAATGGNEKK----------
3M6N Chain:A ((13-281))GSTLRIIEEPQRDVYWIHMHADLRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKRTPHAWAAMQQVREMTT-----AVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQS


General information:
TITO was launched using:
RESULT:

Template: 3M6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 313 -24370 -77.86 -201.40
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -77.86
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.069

(partial model without unconserved sides chains):
PDB file : Tito_3M6N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M6N-query.scw
PDB file : Tito_Scwrl_3M6N.pdb: