Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRLVFNYRKAMREPKKIQQLTENYS-LPFAVE---LIPAINY--FIFV-GLCFGFWYGVRM-------IFPHAFDNSYVIV------IFGIPFFLTMLVTKIKPE----------GKNIYIYFFDFAKYYFFIKLP---------------QKKYCNDRKID----LSNEKQIEFRKLV-KVVDYSNETKNAYE----GNTQEF-AVNKNGRRVGVLPNKKQFDSYA-K-------------------
3QQZ Chain:A ((9-251))----SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSR--GLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP


General information:
TITO was launched using:
RESULT:

Template: 3QQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 735 -90175 -122.69 -536.75
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -122.69
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.108

(partial model without unconserved sides chains):
PDB file : Tito_3QQZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QQZ-query.scw
PDB file : Tito_Scwrl_3QQZ.pdb: