Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTG-HFSMLDTR-LDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVL------LSPPPSGVLSLC-TKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKADLLRICGTDFGLTDP-SWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLI-DFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRY-----EADRTMP-PNRLNGARLPDMKLILS--DGNSERLYSFLQNGTFVLLSLRQEADDHIEVKGLRTVTASLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCSEVIQKGISRWFSVTSRV
3FMW Chain:B ((62-542))----------------LMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFL-EGTQVAKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPY-PVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPEVPRRWERTPDGILVLAFPPEG---------G---WSSSSTGHS---DEGPVTLEDLGAAVARVRG-------PVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDEQHTTPLRGFVEELLGTDEVNRYFTGMITGTDVRYATFAP--ARPHPWPGRFAGG------LVLSRPSGEPVPVAELLRSARPLLLDLAGRADLREATRPWSDRVSVVAGEATVEPPAQALLVRPDGYVAWAGSPAA--TADELRASLARWF------


General information:
TITO was launched using:
RESULT:

Template: 3FMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2352 -179809 -76.45 -405.89
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -76.45
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_3FMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FMW-query.scw
PDB file : Tito_Scwrl_3FMW.pdb: