Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLTKRLLTIYIMLLGLIAWFPGAAQAEEKQPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTEE
2H1B Chain:B ((9-132))------------------------------------FVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNV---GESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDY---


General information:
TITO was launched using:
RESULT:

Template: 2H1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 552 -83803 -151.82 -681.32
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -151.82
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.663

(partial model without unconserved sides chains):
PDB file : Tito_2H1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H1B-query.scw
PDB file : Tito_Scwrl_2H1B.pdb: