Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALVRPFPIVQVVGFQNSGKTTFIERILEKASEQGVHLGCLKHHGHGGEPQTLTEGKDTDRYKAAGADVTAVEGAGVLQLTARRNWDLARLIELYQFLETDCLLIEGFKKAPYPKVVILSEKEDLEALQAVNIIAIIYRKKEHMTEHQGLPVFHADDPVAVDFVLSQLKGESA
4OYH Chain:B ((9-175))-----PFPIVQVVGFQNSGKTTFIERILEKASEQGLNLGCLKHH---------------DRYQAAGADVTAVEGAGVLQLTARRLWDLTRLIELYQFLETDCLLIEGFKKAPYPKVVILSEKEDLEALKTVNTIAIIYRKKEHMTEHQGLPIFHADDPVAVDLVLSQLKGES-


General information:
TITO was launched using:
RESULT:

Template: 4OYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 645 -120677 -187.10 -793.93
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain B : 0.94

3D Compatibility (PKB) : -187.10
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.682

(partial model without unconserved sides chains):
PDB file : Tito_4OYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OYH-query.scw
PDB file : Tito_Scwrl_4OYH.pdb: