Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQIIFDSKTGNVQRFVNKTG--FQQIRKVDEMDHVDTPFVLVTYTTNFGQVPASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
1RLJ Chain:A ((10-135))MVQIIFDSKTGNVQRFVNKTGFQQIR--KVDEMDHVDTPFVLVTYTTNFGQVPASTQSFLEKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKM----


General information:
TITO was launched using:
RESULT:

Template: 1RLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 615 -76034 -123.63 -613.18
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.96

3D Compatibility (PKB) : -123.63
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.664

(partial model without unconserved sides chains):
PDB file : Tito_1RLJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RLJ-query.scw
PDB file : Tito_Scwrl_1RLJ.pdb: