Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKWLAGILLIMLVGYTGWNLYQTYSKKEVGIQEGQQAPDFSLKTLSGEKSSLQDAKGKKVLLNFWATWCKPCRQEMPAMEKLQKEYADK-LAVVAVNFTSAEKSEKQVRAFADTYDLTFPILIDK-KGINADYNVMSYPTTYILDEKGVIQDIHVGTMTKKEMEQKLDLD
2H1B Chain:B ((2-135))----------------------------------EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVN---VGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNL-


General information:
TITO was launched using:
RESULT:

Template: 2H1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 629 -20667 -32.86 -156.56
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -32.86
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.662

(partial model without unconserved sides chains):
PDB file : Tito_2H1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H1B-query.scw
PDB file : Tito_Scwrl_2H1B.pdb: