Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKVEIGQCLIPELCRKKDITINELSEITGIKKQQLSDYNRLVKVDMSIRTAKRIAAALDCNVEDLYEFKVERH
4Y42 Chain:A ((14-75))------LTDTIMMAKIRKNLTFEAINQGTGLSLAFVTAALLG-QHPLPEQAARVVAEKLDLDEDAIRLL-----


General information:
TITO was launched using:
RESULT:

Template: 4Y42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 215 -34854 -162.11 -562.15
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -162.11
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_4Y42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y42-query.scw
PDB file : Tito_Scwrl_4Y42.pdb: