Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MEDLLTNP--LIIAAIIGIISAIFGKKSKEEKQNSQKRKKPQHVQSASPQKKQSKEDAPAPIPNRMEQA--RREAEERRRETARNLKGLERDLAAAKQKTVYTKQKMLQVNKDTVVQGIVLGEVFGPPRAKKPHRTMRPARKN
4LUQ Chain:C ((22-144))DFDKTLTHPNGLVVERPVG----FDARRSAEGFRFDEGGKLR------NPRQLEVQRQDAPPPPDLASRRLGDGEARYKVEEDDGGSAGSEYRLWAAKPA----GARWIVVSASEQSED-------GEPTFALAWALLERARLQ


General information:
TITO was launched using:
RESULT:

Template: 4LUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 552 102630 185.92 869.75
target 2D structure prediction score : 0.19
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : 185.92
2D Compatibility (Sec. Struct. Predict.) : 0.19
1D Compatibility (Hydrophobicity) : 0.65
QMean score : -0.054

(partial model without unconserved sides chains):
PDB file : Tito_4LUQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LUQ-query.scw
PDB file : Tito_Scwrl_4LUQ.pdb: