Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKTDKLLESLNVFIQKAEENQY--KQLGEMVPDFPGKSNIPKYVEEY-EKGIARLLR--RQHKKFLDGLKGFVSKDSEETLKALLVFFTQNLFAEDDFEEEFQELTEGFLQQTIEEMAEVIMDSIDPEVPFKVLSNRTINWIKDWSKKLAEIMKLNTHEVVEDVLTNAIENGSSIQDIELTLK-----DMPQFDRERARTTAITEVLAASSAAQHESYAQSPAVKKKKWRHSGGKKNNPRENHIDLDGTVIGVDEEFQIPGSSE-TCMFPRDPKLSTRERVNCHCVLSPVVDSKILGLSPEEKEEIQREVLANME---
4DO7 Chain:A ((3-289))ALRIDSHQ---HFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELAC-----DEARIAAVVGW--EDLRAPQ-LAERVAEWRGTKLRGFRHQLQD--EADVRAFVDDADFA-RGVAWLQA-NDYVYDVL------VFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDTALARWRAALRELAALP---HVVCKLSGLVTEADWR-RGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAA----SYDEVAS---LVERWAESR---LSAAERSALWGGTAARCYALP


General information:
TITO was launched using:
RESULT:

Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1388 72560 52.28 268.74
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 52.28
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_4DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DO7-query.scw
PDB file : Tito_Scwrl_4DO7.pdb: