Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLVKSR-------------------------------------
4GA2 Chain:A ((2-145))RRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN---------TDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGED


General information:
TITO was launched using:
RESULT:

Template: 4GA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 152 18525 121.88 343.06
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 121.88
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_4GA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GA2-query.scw
PDB file : Tito_Scwrl_4GA2.pdb: