Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQKRPKYMQIIDAAVEVIAENGYHQSQVSKIAKQAGVADGTIYLYFKNKEDILISLFKEKMGQFIERMEEDIKEKA--TAKEKLALVISKHFSLLAGDHNLAIVTQLELRQSNLELRQKINEILKGYLNILDGILTEGIQSGEIKEGLDVRLARQMIFGTIDETVTTWVMNDQKY-DLVALSNSVLELLVSGIHNK
1T56 Chain:A ((22-214))---GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAA-RATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE


General information:
TITO was launched using:
RESULT:

Template: 1T56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 684 -19629 -28.70 -103.31
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -28.70
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_1T56.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T56-query.scw
PDB file : Tito_Scwrl_1T56.pdb: