Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
4YTO Chain:A ((12-106))----------------------------------------------------------ISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQL--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YTO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 12 524 43.63 5.51
target 2D structure prediction score : 0.89
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 43.63
2D Compatibility (Sec. Struct. Predict.) : 0.89
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 1.099

(partial model without unconserved sides chains):
PDB file : Tito_4YTO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YTO-query.scw
PDB file : Tito_Scwrl_4YTO.pdb: