Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGSMDQSIAVKSPLTYAEALANTIMNTYTVEELPPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAIQAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHKD-------GYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEA--KKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDRAYETTLLKAYQGLIQHKTETSEDGAFLVKDICVGTS-AGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK
4CE7 Chain:A ((28-369))-----------YIKTSMIKALEWQEAHPI----FAIHPTDWTNGAYYTGVARAHHTTKNMMYMAALKNQAVANNWQPYT---RLYHADDVAISYSYLYVAENEKR-RNFSDLEPTKKFLDTHLY--EDNAWKAGTNRSKEDKTILWWWCDALFMAPPVINLYAKQSEQPEYLDEMHKYYMETYNRLYDKEEKLFARDSRFVWDGDDE-DKKEPNGEKVFWSRGNGWVIGGLALLLEDMPEDYKHRDFYVNLYKEMASRILEIQP-EDGLWRTSLLSPES-YDHGEVSGSAFHTFALAWGINKGLIDKKYTPAVKKAWKAMANC-QH--DDGRVGWVQNI---PEPASKD--------SYQNFGTGAFLLAGSEILKM------


General information:
TITO was launched using:
RESULT:

Template: 4CE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1808 -11970 -6.62 -36.38
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -6.62
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_4CE7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CE7-query.scw
PDB file : Tito_Scwrl_4CE7.pdb: