Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIVSGQLLRPQDIENWQIDQDLNPLLKEMIETPVQFDYHSIAELMFELKLRMNIVAAAKTLHKSGAKFATFLKTYGNTTYWRVSP------------------------------EGAL----------ELKYRMPPS----KAIRDIAENGPFYAFE------------CATAIVIIYYLALIDTIGEDKFNASFDRIILYDWHYEKLPIYTETG-------HHFFLGDCLYFK-------NPEFDPQKAQWRG--ENVILLGEDKYFAHGLGILNGKQIIDKLNSFRKK--GALQSAYLLSQATRLDVPSLFRIVR-------
4Q3O Chain:A ((31-347))------EVPIPQSI-SAEFKAALAQYPTPSVEEARSFVPTTAAQWRDYVQATNKMQKTKIKNMRKHYGVTVELLDIKGVTVRKITPKSLSPEFKDHVYIDIHGGAYVLFAGLPSIEEGILIAHRLGIVVYSVDYRMPPAYPFPAALDDVKHVYRVLSQQYDANHIFMGGTSAGGGLLLAFVQGLIEN-GVATPRAIYAGTPWADLTKTGDSLYTNEGIDRILITYDGTLGASARLYAGNTPLTHPKLSPIYGDFTDFPPTFLVTGTRDMFLSDTVRVNRKMRDAGVTTVLDVYEGLSHADYLVSHQT-PESQSVYRQLKRFLVGFT


General information:
TITO was launched using:
RESULT:

Template: 4Q3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1059 -18587 -17.55 -78.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -17.55
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.212

(partial model without unconserved sides chains):
PDB file : Tito_4Q3O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q3O-query.scw
PDB file : Tito_Scwrl_4Q3O.pdb: