Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELA---NEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK
4X9S Chain:A ((11-244))-----LLPAVDVRDGQAVRLVHGVSGSETSYG-SPLEAALAWQASGAEWLHLVDLDAAF-GTGDNRALVAEITGAMDIKVELSGGIRDDASLAAALATGCTRVNLGTAALETPEWAAKAIAEHGDRIAVGLDVRGTTLKGRGW----TSEGGDLYETLARLDSEGCARYVVTDIGKDGTLTGPNLELLKNVCAATDRPVVASGGISSLEDLRALAALVPQGVEGAIVGKALYAKAFTLEEALKVV---


General information:
TITO was launched using:
RESULT:

Template: 4X9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1336 -61531 -46.06 -266.37
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -46.06
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.661

(partial model without unconserved sides chains):
PDB file : Tito_4X9S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X9S-query.scw
PDB file : Tito_Scwrl_4X9S.pdb: