Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPKVSVIMTSYNKSDYVAKSISSILSQTFS-DFELFIMDDNSNEETLNVIRPFLNDNRVRFYQS--------DISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIY-MPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKE--TVRPAA-QVT----WN--APCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YP--FYPLDEELDLNYITDQSIHFQLFELEKNEFVRNLPPQRNCRELRESLKKLGMG
3CKJ Chain:A ((47-267))GRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAA----GARVVSREQALPEVPIRPG-------K-GEA-LWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFY--RRP---------GRVTELVARPLLAALRPELGCILQPLGGEYAATRELLTSV-----PFA---PGY--GVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRP--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 917 -31520 -34.37 -171.30
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -34.37
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_3CKJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CKJ-query.scw
PDB file : Tito_Scwrl_3CKJ.pdb: